# meow.it for srs $dbInfo={ creDate: |28-Nov-1999 | -- PRELIMINARY description: | Model Eukaryotic Organism Workshop (MEOW) Genes database |
 
    |A goal of MEOW Genes data is to establish a common
    |summary for the major model eukaryotic organism databases. 
    |
    |              This summary should include
    |*Valid terms:
    |        -Gene symbol
    |        -Gene full name
    |        -Gene identifier number
    |*Synonyms:
    |        -Symbol synonyms
    |        -Full name synonyms
    |        -Secondary gene identifier numbers
    |*Map location information:
    |        -Chromosome and genetic map position
    |        -Molecular map information (simple graphic of DNA length,
    |          encoded transcript(s) and CDS(s) if available)
    |*Gene product information:
    |        -Functional information (from function ontology if available)
    |        -Structural information (from InterProt)
    |        -Homology information with other "MEOW" organisms 
    |*Links to extended gene information in the specialty model organism DBs.
    |*Brief free text gene summary (a few lines at most).
    |
    |                     Sources of data
    |       MEOW data is automatically updated from sources.
    |Mouse: MGD;
    |    WWW site: http://www.informatics.jax.org/
    |    Data: ftp://ftp.informatics.jax.org/pub/informatics/reports/  -- various
    |Drosophila: FlyBase;
    |    WWW site: http://flybase.bio.indiana.edu/
    |    Data: ftp://fbarchive:FlyBase@flybase.net/data-archive/acode/data/FBgn.acode
    |Zebrafish: ZFIN
    |    WWW site: http://zfish.uoregon.edu/ZFIN/
    |    Data:
    |Arabidopsis: AtDB;
    |   WWW site: http://genome-www.stanford.edu/Arabidopsis/
    |   Data: ftp://genome-ftp.stanford.edu/pub/arabidopsis/  -- various
    |Saccharomyces: SGD & YPD;
    |    WWW sites: http://www.proteome.com/YPDhome.html
    |               http://genome-www.stanford.edu/Saccharomyces/
    |    Data: ftp://genome-ftp.stanford.edu/pub/yeast/  -- various esp. from 
    |       registry.genenames.tab and ORF tables
    |C. elegans: ACeDB;
    |   WWW sites: http://stein.cshl.org/elegans/
    |           http://alpha.crbm.cnrs-mop.fr/cgi-bin/ace/simple/elegans/
    |           http://wormsrv1.sanger.ac.uk/
    |   Data: ftp://ncbi.nlm.nih.gov/repository/acedb/celegans/database*
    |Human: NCBI LocusLink;
    |    WWW sites: http://www.ncbi.nlm.nih.gov/LocusLink/
    |    Data: ftp://ncbi.nlm.nih.gov/refseq/LocusLink/LL_tmpl
    |
contact: |Don Gilbert email: |meow@iubio.bio.indiana.edu www: |\ |http://iubio.bio.indiana.edu/meow/ ftp: |\ |ftp://meow:meow@iubio.bio.indiana.edu/meow/archive/data/ ## add acode field tags and labels ! fields:{ ID: |MEOW local ID DID: |Database ID in originating database FBSymbol: |Gene symbol GeneName: |Full gene or locus name Organism: |Species Synonyms: |Synonyms of symbol or name FBPhenotype: |Information on phenotypic expression of gene FBGeneLoc: |Gene map position FBFunction: |Function of gene EnzymeCode: |EC enzyme code } }