Program blastn blastp blastx Database All proteomes (AA) Fruitfly proteome (AA) Human proteome (AA) Mosquito proteome (AA) Mouse proteome (AA) Arabidopsis proteome (AA) C. elegans proteome (AA) Yeast proteome (AA) Zebrafish proteome (AA) ----------- All genomes (NT) Fruitfly genome (NT) Mosquito genome (NT) Arabidopsis genome (NT) C. elegans (NT) Yeast genome (NT)
Enter sequence below in FASTA format Or load it from disk
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15) Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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