euGenes: Homologous Genes Summary Table August-2005 Maximum e-value: 1e-30 Total number of homologous protein sequences Human Chimp Dog Mouse Rat Chicken Pufferfish (Fugu) Zebrafish Fruitfly (D.melano.) Mosquito Bee Worm (C.elegans) Worm (C.briggsae) Mustard weed Rice Soil amoeba (Dicty.) Yeast (S.cerev.) Bacteria (E.coli) All Nident Nseqs Human 0 104502 102774 106786 75930 79090 101552 113362 39149 38477 28798 30936 29756 31107 26963 16319 7991 1304 33860 22120 33860 Chimp 101643 0 78698 85062 57384 56089 71790 76919 28508 28698 20846 21674 20744 21252 17864 10741 5612 835 21506 21327 21506 Dog 121992 102433 0 105369 75537 79755 102453 115688 40311 40379 30052 32236 31219 32462 33765 16574 8332 1464 30308 18173 30308 Mouse 97653 77628 78108 0 59457 57951 74560 81624 30005 29600 21425 23542 22548 23353 20088 11789 5902 954 18941 18881 18941 Rat 90900 71593 71946 81113 0 53348 68888 74692 27308 27467 19857 22228 21174 21598 18565 10778 5450 847 13142 13133 13142 Chicken 109143 89064 90020 94310 67895 0 93298 103960 35061 35107 26198 29488 28348 28794 24016 15316 7442 1386 28416 17672 28416 Pufferfish (Fugu) 120025 98114 93954 96868 73179 75611 0 126819 40075 39690 29468 32577 31205 31423 32432 16846 8158 1486 33003 20012 33003 Zebrafish 122039 96915 94388 101934 72826 74517 104950 0 36924 37609 27617 30503 28902 29172 36673 15976 7562 1319 32062 23461 32062 Fruitfly (D.melano.) 58774 42574 43075 45115 33596 30416 42381 41869 0 30611 19575 18903 18160 18313 15622 9297 5035 800 13472 13414 13472 Mosquito 64669 47153 47397 49025 37097 33617 47261 49763 33522 0 21146 20477 19426 20165 21405 10182 5466 1299 15802 14280 15802 Bee 78185 57926 56355 62170 46847 43364 60359 60150 35017 35083 0 23651 22475 20176 17693 11044 5622 927 16948 9463 16948 Worm (C.elegans) 38852 28242 31300 29463 23508 22270 31380 32804 17616 16800 11700 0 51567 18441 18354 8884 4823 858 19764 19693 19764 Worm (C.briggsae) 38723 27910 30985 29145 23365 21927 30935 31075 17277 16177 11647 56196 0 17829 15243 8730 4743 838 19528 19458 19528 Mustard weed 21645 16637 19729 17899 15300 15240 20387 21942 12335 12135 7923 13095 12534 0 118047 13275 7682 2003 28860 28826 28860 Rice 19005 14464 17437 15697 13397 13236 18063 21941 10913 10878 6837 11497 10993 107489 0 12247 6882 1967 48467 48083 48467 Soil amoeba (Dicty.) 16433 12137 15068 14114 11873 12081 15844 19308 9231 8790 6027 9455 9306 19509 22310 0 5114 892 13671 13489 13671 Yeast (S.cerev.) 10210 7607 9282 8152 6837 6815 9054 9312 5865 5480 3631 6113 6000 13031 11178 5886 0 849 5777 5769 5777 Bacteria (E.coli) 1366 1010 1241 1222 1050 1003 1219 1186 975 1410 571 1159 1134 2935 2910 1098 1034 0 4242 4235 4242 Number of protein sequences with one or more homologs (asymmetrical because blast query seq. is filtered) Human Chimp Dog Mouse Rat Chicken Pufferfish (Fugu) Zebrafish Fruitfly (D.melano.) Mosquito Bee Worm (C.elegans) Worm (C.briggsae) Mustard weed Rice Soil amoeba (Dicty.) Yeast (S.cerev.) Bacteria (E.coli) Any Nseqs Human 0 29529 27761 26830 23860 22947 22166 21368 13276 13123 11446 10538 10418 5832 5210 5662 3919 838 31101 33860 Chimp 18898 0 16865 16194 14283 13792 13137 12579 7673 7636 6532 6009 5956 3430 3050 3343 2358 499 19179 21506 Dog 28144 27139 0 26740 23816 23302 22771 22053 13992 13947 12092 11259 11157 6249 5492 6013 4177 952 29034 30308 Mouse 16384 15674 16066 0 14067 13069 12662 12231 7887 7789 6759 6331 6268 3630 3196 3558 2432 557 17167 18941 Rat 12409 11907 12184 12420 0 10631 10412 10037 6592 6521 5660 5378 5298 3062 2741 2974 2097 484 12844 13142 Chicken 22452 21676 22190 21528 19697 0 20547 19946 12368 12307 10725 9997 9943 5504 4866 5448 3721 889 23740 28416 Pufferfish (Fugu) 25223 24411 24984 24492 22639 23945 0 25854 14835 14844 13024 12108 11921 6277 5603 6225 4189 991 29356 33003 Zebrafish 24213 23096 23729 23224 21507 22744 25550 0 13041 13273 11558 10588 10329 5547 5109 5572 3695 860 28224 32062 Fruitfly (D.melano.) 6057 5636 5997 5900 5387 5539 5882 5421 0 8161 5980 4632 4581 2742 2421 2708 1925 485 11259 13472 Mosquito 6856 6327 6759 6662 6099 6288 6680 6212 9437 0 6854 5198 5107 3089 2735 2994 2169 778 10282 15802 Bee 8795 8281 8627 8517 7810 8186 8657 8166 10209 10206 0 6525 6411 3292 2957 3286 2315 551 11563 16948 Worm (C.elegans) 5019 4568 4922 4891 4490 4612 4824 4519 4685 4709 3817 0 14883 2567 2297 2495 1829 480 15003 19764 Worm (C.briggsae) 4949 4504 4860 4811 4419 4588 4771 4424 4615 4597 3757 14329 0 2494 2226 2430 1800 469 14383 19528 Mustard weed 5527 5040 5410 5460 4881 5024 5404 4904 4753 4831 3812 4491 4399 0 17730 5086 3612 1326 18356 28860 Rice 4649 4208 4532 4584 4151 4174 4634 4438 3937 4079 3148 3708 3637 16808 0 4180 3051 1254 17453 48467 Soil amoeba (Dicty.) 3044 2722 2996 2948 2622 2745 2924 2745 2614 2609 2119 2408 2362 2758 2475 0 1900 524 3939 13671 Yeast (S.cerev.) 1785 1617 1763 1733 1614 1593 1710 1579 1675 1665 1280 1541 1514 1732 1559 1650 0 473 2833 5777 Bacteria (E.coli) 412 355 394 388 349 372 390 348 365 668 278 350 351 574 543 431 369 0 1062 4242 Percent of sequences with one or more homologs Human Chimp Dog Mouse Rat Chicken Pufferfish (Fugu) Zebrafish Fruitfly (D.melano.) Mosquito Bee Worm (C.elegans) Worm (C.briggsae) Mustard weed Rice Soil amoeba (Dicty.) Yeast (S.cerev.) Bacteria (E.coli) Any Human 0 87 81 79 70 67 65 63 39 38 33 31 30 17 15 16 11 2 91 Chimp 87 0 78 75 66 64 61 58 35 35 30 27 27 15 14 15 10 2 89 Dog 92 89 0 88 78 76 75 72 46 46 39 37 36 20 18 19 13 3 95 Mouse 86 82 84 0 74 68 66 64 41 41 35 33 33 19 16 18 12 2 90 Rat 94 90 92 94 0 80 79 76 50 49 43 40 40 23 20 22 15 3 97 Chicken 79 76 78 75 69 0 72 70 43 43 37 35 34 19 17 19 13 3 83 Pufferfish (Fugu) 76 73 75 74 68 72 0 78 44 44 39 36 36 19 16 18 12 3 88 Zebrafish 75 72 74 72 67 70 79 0 40 41 36 33 32 17 15 17 11 2 88 Fruitfly (D.melano.) 44 41 44 43 39 41 43 40 0 60 44 34 34 20 17 20 14 3 83 Mosquito 43 40 42 42 38 39 42 39 59 0 43 32 32 19 17 18 13 4 65 Bee 51 48 50 50 46 48 51 48 60 60 0 38 37 19 17 19 13 3 68 Worm (C.elegans) 25 23 24 24 22 23 24 22 23 23 19 0 75 12 11 12 9 2 75 Worm (C.briggsae) 25 23 24 24 22 23 24 22 23 23 19 73 0 12 11 12 9 2 73 Mustard weed 19 17 18 18 16 17 18 16 16 16 13 15 15 0 61 17 12 4 63 Rice 9 8 9 9 8 8 9 9 8 8 6 7 7 34 0 8 6 2 36 Soil amoeba (Dicty.) 22 19 21 21 19 20 21 20 19 19 15 17 17 20 18 0 13 3 28 Yeast (S.cerev.) 30 27 30 29 27 27 29 27 28 28 22 26 26 29 26 28 0 8 49 Bacteria (E.coli) 9 8 9 9 8 8 9 8 8 15 6 8 8 13 12 10 8 0 25 # Distance matrix of homologs (PHYLIP infile) 18 Hs_Human 0.00000 0.12459 0.12576 0.17131 0.17555 0.26609 0.29055 0.30687 0.57916 0.58928 0.57151 0.71742 0.71945 0.81813 0.87511 0.80506 0.78764 0.93906 Pt_Chimp 0.12459 0.00000 0.16018 0.20974 0.21492 0.29794 0.32474 0.34737 0.61243 0.62227 0.60383 0.74473 0.74621 0.83294 0.88568 0.82272 0.80523 0.94656 Cf_Dog 0.12576 0.16018 0.00000 0.13476 0.14355 0.22513 0.24583 0.26614 0.54660 0.55605 0.54600 0.68974 0.69150 0.80318 0.86264 0.79123 0.77850 0.93785 Mm_Mouse 0.17131 0.20974 0.13476 0.00000 0.15613 0.27621 0.29469 0.31496 0.57283 0.58359 0.57031 0.70914 0.71136 0.80958 0.86834 0.79826 0.78581 0.93956 Rr_Rat 0.17555 0.21492 0.14355 0.15613 0.00000 0.24895 0.26088 0.28274 0.54927 0.55892 0.55425 0.68180 0.68529 0.79894 0.85289 0.79095 0.78053 0.94045 Gg_Chicken 0.26609 0.29794 0.22513 0.27621 0.24895 0.00000 0.27569 0.29435 0.57680 0.58449 0.56978 0.70742 0.70757 0.81611 0.87132 0.80374 0.79665 0.94051 Fr_Pufferf 0.29055 0.32474 0.24583 0.29469 0.26088 0.27569 0.00000 0.20986 0.55694 0.56375 0.54729 0.69452 0.69724 0.81128 0.86731 0.79875 0.78854 0.93902 Dr_Zebrafi 0.30687 0.34737 0.26614 0.31496 0.28274 0.29435 0.20986 0.00000 0.59543 0.59645 0.57884 0.72056 0.72565 0.82853 0.87454 0.81271 0.80571 0.94557 Dm_Fruitfl 0.57916 0.61243 0.54660 0.57283 0.54927 0.57680 0.55694 0.59543 0.00000 0.39851 0.47687 0.70956 0.71182 0.81589 0.86953 0.80389 0.78358 0.93898 Ag_Mosquit 0.58928 0.62227 0.55605 0.58359 0.55892 0.58449 0.56375 0.59645 0.39851 0.00000 0.48203 0.71640 0.72070 0.81856 0.87138 0.80984 0.78726 0.89665 Am_Bee 0.57151 0.60383 0.54600 0.57031 0.55425 0.56978 0.54729 0.57884 0.47687 0.48203 0.00000 0.71093 0.71467 0.83684 0.88029 0.82556 0.82092 0.95098 Ce_Worm 0.71742 0.74473 0.68974 0.70914 0.68180 0.70742 0.69452 0.72056 0.70956 0.71640 0.71093 0.00000 0.25660 0.85725 0.90364 0.84881 0.82036 0.94660 Cb_Worm 0.71945 0.74621 0.69150 0.71136 0.68529 0.70757 0.69724 0.72565 0.71182 0.72070 0.71467 0.25660 0.00000 0.85993 0.90548 0.85139 0.82288 0.94662 At_Mustard 0.81813 0.83294 0.80318 0.80958 0.79894 0.81611 0.81128 0.82853 0.81589 0.81856 0.83684 0.85725 0.85993 0.00000 0.51943 0.81101 0.78752 0.90937 Og_Rice 0.87511 0.88568 0.86264 0.86834 0.85289 0.87132 0.86731 0.87454 0.86953 0.87138 0.88029 0.90364 0.90548 0.51943 0.00000 0.86636 0.83359 0.92306 Dd_Soil_am 0.80506 0.82272 0.79123 0.79826 0.79095 0.80374 0.79875 0.81271 0.80389 0.80984 0.82556 0.84881 0.85139 0.81101 0.86636 0.00000 0.78770 0.93003 Sc_Yeast 0.78764 0.80523 0.77850 0.78581 0.78053 0.79665 0.78854 0.80571 0.78358 0.78726 0.82092 0.82036 0.82288 0.78752 0.83359 0.78770 0.00000 0.91557 Ec_Bacteri 0.93906 0.94656 0.93785 0.93956 0.94045 0.94051 0.93902 0.94557 0.93898 0.89665 0.95098 0.94660 0.94662 0.90937 0.92306 0.93003 0.91557 0.00000